Specimen Details

ICMP 12878 – Pseudopithomyces palmicola Jun F. Li, Ariyaw. & K.D. Hyde

Data provider:

International Collection Of Microorganisms

Barcode:

ICMP 12878

Culture type:

Fungal Culture

Loan status:

Active

Database record added:

25 January 2002

Database record updated:

04 July 2025

Components

Primary component

Active identification

Determined name:

Pseudopithomyces palmicola Jun F. Li, Ariyaw. & K.D. Hyde

Determiner:

B.S. Weir

Identification date:

2022-06-21 (Verbatim: 21 Jun 2022)

Preferred name:

Pseudopithomyces palmicola Jun F. Li, Ariyaw. & K.D. Hyde

Division:

Ascomycota

Class:

Dothideomycetes

Order:

Pleosporales

Family:

Didymosphaeriaceae

Identification type:

Determination

Note:

ITS sequence

Substrate:

Pasture

Other identifications

Identification

Determined name:

Pithomyces chartarum

Determiner:

Identification date:

Preferred name:

Pseudopithomyces chartarum (Berk. & M.A. Curtis) J.F. Li, Ariyawansa & K.D. Hyde

Active:

Identification type:

Received as

Identification

Determined name:

Leptosphaerulina chartarum Cec. Roux

Determiner:

Identification date:

Preferred name:

Leptosphaerulina chartarum Cec. Roux

Active:

Identification type:

Determination

Collection events

Primary collection event

Collection event type:

Field

Standard locality

Location:

Ruakura

Georeferences:

Latitude and Longitude (WGS84): -37.77465 175.310297

Verbatim locality:

Ruakura

Verbatim collector:

R.G. Collin

Standardised collector:

Roger G. Collin

Verbatim date:

1993/08/04

Start date:

1993-08-04

Country:

New Zealand

New Zealand Area Codes:

Waikato

Native lands:

Ngāti Hauā

Waikato

Georeferences:

New Zealand Map Grid: 2713710E 6378320N (WGS84 -37.774446 175.310219)

Culture flags

Price Category:

Category 1

Culture notes

Other Details:

single spore isolate

Strain Data:

Sporidesmin non-producer
RE Beever

Strain Data:

does not produce sporidesmin toxin
Park, Parkes, Beever, 1995

External links

CIS - PDD:

PDD 65535

Datastore:

10.7931/m6kn-3e23

GenBank:

AM231398 - 18S rRNA, 5.8S rRNA, 28S rRNA

OR691784 - genomic DNA

JAYFEW000000000 - genomic DNA

Note: pacbio genome

Literature:

Mysterud, Ivar; Høiland, Klaus; Koller, Gry; Stensrud, Øyvind (2007)Molecular characterization and evaluation of plant litter-associated fungi from the spring ‘grazing corridor’ of a sheep herd vulnerable to alveld disease.Mycopathologia164(5)201-215. DOI: 10.1007/s11046-007-9045-4

Collin, R. G.; Towers, N. R. (1995)First reported isolation from New Zealand pasture ofPithomyces chartarum unable to produce sporidesmin.Mycopathologia130(1)37-40. DOI: 10.1007/BF01104347

Weir, B.S.; Sidhu, J.S.; Brosnahan, C.L.; Lee, D.; Maclean, P.H.; Park, D.; Jauregui, R.; Johnson, R.D.; Petterson, M.E.; Williams, A.F.R.; Morse, N.R.; Sprosen, J.M.; Lim, Y.-W.; Bridgeman, B.J.; Walker, T.J.; Kumar, S.; Mace, W.J.; Prakash, S.; Liu, X.; Hume, D.E.; Couldrey, C.; Beever, R.E.; Voisey, C.R. (2025)Global diversity analysis of plant-associated Pseudopithomyces fungi reveals a new species producing the toxin associated with facial eczema in livestock: Pseudopithomyces toxicarius sp. nov.Studies in Mycology. DOI: 10.3114/sim.2025.112.02

Culture events

Isolated:

Actioned by:

Roger G. Collin (Reference number RC33)

Date:

01 June 1994 (Verbatim: 01 Jun 1994)

Deposited:

Note:

Derived from earliest batch date

Actioned by:

Ross E. Beever (Reference number REB 795-1)

Date:

01 March 1996 (Verbatim: 01 Mar 1996)

Transferred from:

Actioned by:

Roger G. Collin (Reference number RC33)

Duplicates

: CBS 153581

Direction:

Sent

Permissions

Project permits

Project title:

Local Contexts - ICMP Culture Collection

Reference:

ICMP Collection - Local Contexts

Biocultural (BC) Notice